PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022960195.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 245aa MW: 28381.8 Da PI: 8.7426

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022960195.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.9	8.7e-33	98	155	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCts C+vkk+ver+ +dp++v++tYeg+H h+ XP_022960195.1 98 EDGYRWRKYGQKAVKNSPYPRSYYRCTSVACNVKKRVERCLKDPSIVITTYEGQHPHS 155 8*******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MELDLIWSQF DMFSTSSYPI QNPAIDPENL EILNAWPTSS TQLINDELSE LKLQEEEKPR 60 PKTVKPNHSS KTKKTNQKKK EQEQRYTFMT KSKVDHLEDG YRWRKYGQKA VKNSPYPRSY 120 YRCTSVACNV KKRVERCLKD PSIVITTYEG QHPHSTPVMA RSTFVPPPIS TSLHEGSTSF 180 TSTPPYLFHN QNVHNLNFAR HPNDFVAPSF HHERLPQHTA SFDPPTHLFA STTNYELLQD 240 VSWST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	5e-42	WRKY family protein