PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022960259.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 299aa    MW: 34172.5 Da    PI: 6.1021
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022960259.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix62.11.3e-1929118286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     Wt+qe+  Li+a++e++ +l+rg+lk  +Weev+  +      ++   +++++qC++k+e+l++r++ +k++   +t +sss++ yf+ ++
  XP_022960259.1  29 WTHQETVNLIQAYQEKWYALERGQLKSSQWEEVAVTVaarcgySHFDPSKTSVQCRHKMEKLRQRFRSEKHRLAIGT-QSSSRWLYFELMN 118
                     **********************************9998655544445589************************995.66679*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MATPPPAPLS SSKSISTVAT TEKVQPIPWT HQETVNLIQA YQEKWYALER GQLKSSQWEE  60
VAVTVAARCG YSHFDPSKTS VQCRHKMEKL RQRFRSEKHR LAIGTQSSSR WLYFELMNNL  120
LRGPLPISAR PMSSIPFDND EDQTAEKSDN YNSDYEEEEK NRSKSKSISN ILRRPIAFDG  180
SSSRRRNRNS SEEDEDDEEE ADIRVSRFPE EDLAGEAAVA EEGKEMCSKL AAEIRLFADR  240
LVGMESLKME MMKEAEMNRI AMENRRIEMI LESEKKIVNS IAKAFGSPPP KRLKIGHDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.11e-29Trihelix family protein