PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022960349.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 258aa MW: 29266.2 Da PI: 9.355

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022960349.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.1	2e-50	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv +yL++kv + +l++ ++i++vd++k++PwdLp + e+e yfFs+r+ ky++g+r+nra++sgyWkatg dk++l++ XP_022960349.1 14 LPPGFRFHPTDEELVLQYLNRKVLSCPLPA-SIIPDVDVCKADPWDLPGN---MEQERYFFSTREAKYPHGNRSNRAAASGYWKATGIDKQILAS 104 79**************************.89***********54...46799******************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++vglkktLvfy+g+ p+g++tdW+mheyrl XP_022960349.1 105 kANQVVGLKKTLVFYRGKPPHGSRTDWIMHEYRL 138 57778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MEKLNFVKNG VLRLPPGFRF HPTDEELVLQ YLNRKVLSCP LPASIIPDVD VCKADPWDLP 60 GNMEQERYFF STREAKYPHG NRSNRAAASG YWKATGIDKQ ILASKANQVV GLKKTLVFYR 120 GKPPHGSRTD WIMHEYRLAS PPVVCFNVAQ EKTTLQSCVA PMENWVLCRI FLKKRNGQQS 180 EEEKDAISNR KARRIGKPVF YEFMRKERGE TDLNLAPSSS SSGSSGLTEI SNNELDDHEE 240 SSSSSSSCNT FPYLRRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-102	NAC family protein