PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022960396.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 221aa    MW: 24603.1 Da    PI: 7.7936
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022960396.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-2056105255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f+tae Aa a+++a+++++g
  XP_022960396.1  56 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEAAAIAYDNAALRFKG 105
                     7********.**********9...3.35************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MRLAFTNLIV KRRKVDRRHG KRPLPWEAPA EEEERDQNDL GSSNLSQNQE SGRKRHYRGV  60
RQRPWGKWAA EIRDPNKAAR VWLGTFDTAE AAAIAYDNAA LRFKGNKAKL NFPERLQPNP  120
PHFAFLPAGG AGASSAPLAP TPPAPSLPPS HEEAFPGLHQ YAQLLSSTDA DFPYYSSTLL  180
NQPHQYPFYS SSSSSQHQEQ EQDQDQDLGP GGSTNQTNVD C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11122KRRKVDRRHGKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.19e-31ERF family protein