PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022960413.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 428aa MW: 48484.7 Da PI: 5.6519

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022960413.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	48	2.8e-15	92	147	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvk..gLtlehvkSHLQkYRl 55 k+rl WtpeLH++F+e +q +ek +Pk+il m k +t+e+v+SHLQk+Rl XP_022960413.1 92 KERLIWTPELHQCFLEYYNQF-PNEKRVPKKILGEMRRKfpFVTRENVASHLQKHRL 147 68*****************.999*******754228************8 PP
2	Myb_DNA-binding	27	1e-08	94	146	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg...kgRtlkqcksrwqkyl 48 r+ WT+e+++ ++++ +q++++ +k+I +m t++++ s++qk++ XP_022960413.1 94 RLIWTPELHQCFLEYYNQFPNEkrVPKKILGEMRrkfPFVTRENVASHLQKHR 146 667*****************************9995559999*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MILPDFSDDV PSDGFDVHGG GADYIVQPSK DNPSFVSTDV NPVGVPHSSG DVDGRVGILP 60 VIDDRTRRNS SLNAKSSKKK NGYYHRRNGE KKERLIWTPE LHQCFLEYYN QFPNEKRVPK 120 KILGEMRRKF PFVTRENVAS HLQKHRLYLK QSNNKEQEKL SKPSTKSVPR KQINEESNIH 180 QILNNTAIST CPNAVLPHQS HSISINPNAQ PPLQTHTLQE PMQNQVFSQF DDTHLIEQDI 240 VLMPSSFDPW NDLPYSNTMN VFDPFGGQSS NTASCFPVMV DNFTPPMLSY HQLVISNIDG 300 NGYGNGNGYG YGNGNGNSFH PMMGNTFGGS SINNYSNGAL PNILDYNMNY QLDDVQFHDI 360 NNIYALGTYP DSLQFDYPLN FNFQNELQVQ DFDQAVQSML YPPATHLVDY YASTLPQIYD 420 NRGEEHYE

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MILPDFSDDV PSDGFDVHGG GADYIVQPSK DNPSFVSTDV NPVGVPHSSG DVDGRVGILP  60
VIDDRTRRNS SLNAKSSKKK NGYYHRRNGE KKERLIWTPE LHQCFLEYYN QFPNEKRVPK  120
KILGEMRRKF PFVTRENVAS HLQKHRLYLK QSNNKEQEKL SKPSTKSVPR KQINEESNIH  180
QILNNTAIST CPNAVLPHQS HSISINPNAQ PPLQTHTLQE PMQNQVFSQF DDTHLIEQDI  240
VLMPSSFDPW NDLPYSNTMN VFDPFGGQSS NTASCFPVMV DNFTPPMLSY HQLVISNIDG  300
NGYGNGNGYG YGNGNGNSFH PMMGNTFGGS SINNYSNGAL PNILDYNMNY QLDDVQFHDI  360
NNIYALGTYP DSLQFDYPLN FNFQNELQVQ DFDQAVQSML YPPATHLVDY YASTLPQIYD  420
NRGEEHYE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58080.1	3e-15	ARR-B family protein