PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022960998.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 487aa MW: 53779.8 Da PI: 7.101

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022960998.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.9	4.1e-36	57	199	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_022960998.1 57 LPAGVKFDPTDQELI-EHLEAKVKSKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 149 799**********.99*****5553344444434666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022960998.1 150 ETRWHKTGKTRPVMA-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 199 778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MRNSSEIIGT IVGVGGGGGG GSDSLLDAKL EQHQLCGSKH CPGCGHKLEG RPNWVGLPAG 60 VKFDPTDQEL IEHLEAKVKS KDMKSHPLID EFIPTIEGED GICYTHPEKL PGVTRDGLSR 120 HFFHRPSKAY TTGTRKRRKI QTECDLQGGE TRWHKTGKTR PVMANGKQKG CKKILVLYTN 180 FGKNRKPEKT NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSERA VAAAEGSFEV 240 ANLSRRENAA SGSCSSMAQT EDMSPAATAS VGGSVASFSS LDIQPHLKSD HFGFVPFRTC 300 FDQVGMEEGS TGRKMGIQDG RGGGTCSGGG EFELRDHRHE RTSALDHHHH QLVVAHDEHH 360 HHHHHSVVNH HQPTTAFHVT SNPTHQISTI ISPSPLLLLD HDSYHLHHSP IILQNQPFHQ 420 QEGESEHHKM GGRSASGLEE LIMGCTSSSS ITHQPETSIA SGREADPWMK YSSFWPDSDN 480 PNLHGHG

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MRNSSEIIGT IVGVGGGGGG GSDSLLDAKL EQHQLCGSKH CPGCGHKLEG RPNWVGLPAG  60
VKFDPTDQEL IEHLEAKVKS KDMKSHPLID EFIPTIEGED GICYTHPEKL PGVTRDGLSR  120
HFFHRPSKAY TTGTRKRRKI QTECDLQGGE TRWHKTGKTR PVMANGKQKG CKKILVLYTN  180
FGKNRKPEKT NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSERA VAAAEGSFEV  240
ANLSRRENAA SGSCSSMAQT EDMSPAATAS VGGSVASFSS LDIQPHLKSD HFGFVPFRTC  300
FDQVGMEEGS TGRKMGIQDG RGGGTCSGGG EFELRDHRHE RTSALDHHHH QLVVAHDEHH  360
HHHHHSVVNH HQPTTAFHVT SNPTHQISTI ISPSPLLLLD HDSYHLHHSP IILQNQPFHQ  420
QEGESEHHKM GGRSASGLEE LIMGCTSSSS ITHQPETSIA SGREADPWMK YSSFWPDSDN  480
PNLHGHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-137	NAC family protein