PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961084.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 439aa MW: 48844 Da PI: 5.3634

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961084.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.7	6.4e-34	226	280	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHe+Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_022961084.1 226 RPRMRWTPELHEAFVEAVNKLGGSENATPKGVLKLMNVEGLTIYHVKSHLQKYRT 280 59****************************************************8 PP
2	Myb_DNA-binding	57.5	3e-18	228	279	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_022961084.1 228 RMRWTPELHEAFVEAVNKLGGSenaTPKGVLKLMNvEGLTIYHVKSHLQKYR 279 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MSSSYRVLPK PFEEKYPKLP VSCQGSSHSE AMRHPIPRQA PPLVSGTVGH LFSSSSGLRN 60 GFPLIQPLSQ ERNAEFSRFI SSSANDEPLL GPRDSSHSEV MTNNLNENNA SWSDDTLQGL 120 LDFSENVPDQ NGQAQSIAGV LMADEQDKRN DWPDWADQFI SVDDALEPNW NEIFSDGNGG 180 DPKPELLKSS SAGFHAPQNQ TNQVDSVPTA EFHLVSSNSL STSTNRPRMR WTPELHEAFV 240 EAVNKLGGSE NATPKGVLKL MNVEGLTIYH VKSHLQKYRT ARYKPESSEG SSGKKINHIE 300 EMKSLDLKTS MGITEALRLQ IEVQKRLHEQ LEIQRNLQLR IEEQGKYLQE MFEQQRKMES 360 KLKTSSSILE NMPRPNDQPE NSEQGHVAAG MTTENAREED GSPAASRKQK AHEREAIELS 420 EGNSSSPDTK RAKSDATAL

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MSSSYRVLPK PFEEKYPKLP VSCQGSSHSE AMRHPIPRQA PPLVSGTVGH LFSSSSGLRN  60
GFPLIQPLSQ ERNAEFSRFI SSSANDEPLL GPRDSSHSEV MTNNLNENNA SWSDDTLQGL  120
LDFSENVPDQ NGQAQSIAGV LMADEQDKRN DWPDWADQFI SVDDALEPNW NEIFSDGNGG  180
DPKPELLKSS SAGFHAPQNQ TNQVDSVPTA EFHLVSSNSL STSTNRPRMR WTPELHEAFV  240
EAVNKLGGSE NATPKGVLKL MNVEGLTIYH VKSHLQKYRT ARYKPESSEG SSGKKINHIE  300
EMKSLDLKTS MGITEALRLQ IEVQKRLHEQ LEIQRNLQLR IEEQGKYLQE MFEQQRKMES  360
KLKTSSSILE NMPRPNDQPE NSEQGHVAAG MTTENAREED GSPAASRKQK AHEREAIELS  420
EGNSSSPDTK RAKSDATAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	2e-91	G2-like family protein