PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961089.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 253aa    MW: 27377 Da    PI: 10.4776
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961089.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.91.6e-19112145134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022961089.1 112 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 145
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAPPYHDDLL RRSSSSSSSS SSSLSFPAPD HSNSDDPRRL QLKHESESSS CCENHNTHND  60
LVNWSSSSSK IRLLINSNQI NTATQMIHGG RNSHDLNRTT MLNDGAAIIR TCSDCNTTKT  120
PLWRSGPRGP KSLCNACGIR QRKARRAMAE AAAMNGGIPC GGKSAAIILK TNKAVQHKIM  180
TKPAAKKLKR KRKDDAVVAG GGGGCGGKKG CFENIKMGRR LSEISSSYQR VFPQDEREAA  240
ILLMTLSYGL LHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.14e-17GATA family protein