PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961090.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 251aa    MW: 26729.2 Da    PI: 11.2841
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961090.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.91.6e-19110143134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022961090.1 110 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 143
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MSHLLTPRPS SPSPLRPILP PSPPPWLRLI TTTFSAVPPP PPPPPPPPSL SLPPITPTPT  60
TLAGCSSNTR LLINSNQINT ATQMIHGGRN SHDLNRTTML NDGAAIIRTC SDCNTTKTPL  120
WRSGPRGPKS LCNACGIRQR KARRAMAEAA AMNGGIPCGG KSAAIILKTN KAVQHKIMTK  180
PAAKKLKRKR KDDAVVAGGG GGCGGKKGCF ENIKMGRRLS EISSSYQRVF PQDEREAAIL  240
LMTLSYGLLH G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.15e-17GATA family protein