PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961091.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 228aa    MW: 24655.2 Da    PI: 10.8553
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961091.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.11.4e-1987120134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022961091.1  87 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 120
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MAPPYHDDLL RRSSSSSSSS SSSLSFPAPD HSNSDDPRRL QLKHEIRLLI NSNQINTATQ  60
MIHGGRNSHD LNRTTMLNDG AAIIRTCSDC NTTKTPLWRS GPRGPKSLCN ACGIRQRKAR  120
RAMAEAAAMN GGIPCGGKSA AIILKTNKAV QHKIMTKPAA KKLKRKRKDD AVVAGGGGGC  180
GGKKGCFENI KMGRRLSEIS SSYQRVFPQD EREAAILLMT LSYGLLHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.13e-17GATA family protein