PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961092.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 213aa    MW: 22974.3 Da    PI: 10.7716
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961092.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.21.3e-1972105134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022961092.1  72 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 105
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MAPPYHDDLL RRSSSSSSSS SSSLSFPAPD HSNSDDPRRL QLKHEMIHGG RNSHDLNRTT  60
MLNDGAAIIR TCSDCNTTKT PLWRSGPRGP KSLCNACGIR QRKARRAMAE AAAMNGGIPC  120
GGKSAAIILK TNKAVQHKIM TKPAAKKLKR KRKDDAVVAG GGGGCGGKKG CFENIKMGRR  180
LSEISSSYQR VFPQDEREAA ILLMTLSYGL LHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.13e-17GATA family protein