PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961106.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 248aa    MW: 28527.2 Da    PI: 8.9662
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961106.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.31.6e-35251172103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+ye++ed+++++++sw ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgFkk+  e+         weF +++Fkkg+k+ll  
  XP_022961106.1  25 FLAKTYELVEDATTDHIVSWGHSHTTFVVWRPPEFATHILPNYFKHNNFSSFVRQLNTYGFKKIVAER---------WEFGNENFKKGEKQLLLA 110
                     9*********************99*****************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+ks+
  XP_022961106.1 111 IQRRKSH 117
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEEMIENYSV GFCSAESEKA NPAPFLAKTY ELVEDATTDH IVSWGHSHTT FVVWRPPEFA  60
THILPNYFKH NNFSSFVRQL NTYGFKKIVA ERWEFGNENF KKGEKQLLLA IQRRKSHNHN  120
NNLHQQQQIP FQFCYTTAAA ATTTTSSSSS DRDILAALTQ DNRRLRRRNY MLLSELTQMK  180
NLYSDIIYFI QNHVKPLDHK YGRSVPKLVD LEPPPPQTEA GVEEGSGSVK LFGVPIRGKK  240
RMHHEEGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.19e-62HSF family protein