PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961131.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 275aa    MW: 30816.6 Da    PI: 5.577
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961131.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.8e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++  +  G  +W+++++  g+ R++k+c++rw +yl
   XP_022961131.1 14 KGPWTAEEDKKLINFLHTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding506.8e-1671111547
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++ E++  vd++ q+G++ W++Ia++++ gRt++++k++w+++
   XP_022961131.1  71 SEYEEKMVVDLHSQMGNR-WSKIASHLP-GRTDNEIKNHWNTH 111
                      6779**************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE EDKKLINFLH TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SEYEEKMVVD LHSQMGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLKKMG  120
IDPQTHKPIS PLSNDAHLAH QNDQKSRQQQ SPPSPSPSPS RALEEHDKEI VIDETDVMNL  180
LVDGFCTEED VSLIEPLQDV GVPCASSSST TSTPSSSTPS SSSSFCSHSE SAANLLQDLV  240
NEFPEFEWPN ICENGLLDEL LEDELGGWDF IIDNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.14e-90MYB family protein