PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961172.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 423aa    MW: 46814.3 Da    PI: 8.9346
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961172.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383e-12357402655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR +i +++ +L+el+P+     +k  + +++L +AveYIk Lq
  XP_022961172.1 357 SIAERVRRTKISERMRKLQELVPNM----DKQTNTSDMLDLAVEYIKGLQ 402
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MEADFQQHHH ILHEQYQQQP QMNSGLTRYR SAPSSYFRRL TDREFCDQFF NRPSSPETER  60
IFARFMTSGT AGGGGGSPEV SSQNLDESPK NAQAGEVFTA TEANQQTPYM RNETKAIHQL  120
PSNVNGNYPP ASSTPSFYQS SMKPPLPNQG MISGTEGSGS MGIDLKPRIR TDGGRTSNLI  180
RQSSSPAGLF DHIKINDGGY AALRGMGKFG TGNSVNEEAS LPSPSRLKRS LPPHSSGLMS  240
PMAGIEKKCI REKTNQDTKG FAESKTSDYG STNFPVGSWE ESAVMSDNDE DVKSYSNFNI  300
PDTQKVDPVN RPPMLAHHLS LPNTSAEMNA IEKILQFSDS VPCKLRAKRG CATHPRSIAE  360
RVRRTKISER MRKLQELVPN MDKQTNTSDM LDLAVEYIKG LQKQVQTLSD NRAKCKCSHS  420
QLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.14e-78bHLH family protein