PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961312.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CPP

Protein Properties

Length: 591aa MW: 63971.9 Da PI: 7.293

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961312.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.2	3.8e-14	118	157	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C++C N+ e+ XP_022961312.1 118 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCTNCYNNVEN 157 89************************.******9875 PP
2	TCR	50.9	3.1e-16	202	241	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_022961312.1 202 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 241 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MGEVGNRETD NLPPPNAQTN SAEVVSSDVP AKKLARQLNF TGLGGAVLPD LPHFHPQPRS 60 QSDSPAVMVV QSQSQPKSPQ HLMVSPIGTQ APHPVRKPDS PKSRSRSNVE TKDATPKKQK 120 QCNCKHSRCL KLYCECFASG IYCDGCNCTN CYNNVENEAF RREAVETTLE RNPNAFRPKI 180 ASSPHGTREV RDEVGDVVML GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF 240 EGSEERQALF HGDHVSNMAY IQQAANAAIT GAIGSSGYAY LPTSKKRKVP ELCFASVGKD 300 PPLNSIPQFH QVNNLMSSGT STSSPLPVAH AGSPAAPGTS KFSFRSLLAD LVQPHDLKEL 360 CSVLVVLSSE VAKNIAEKRI AEEQINDPLQ ISRASSAGDG SQHQKADEKA ADGGCGSLNQ 420 SEMPVHDNHS DSSDMTKSRP MSPGTLALMC DERDTMFMGA APADRLAGHG CNTSSHVPDK 480 SVSEVYIEQE RIVLTKFRDC LNKLITLGEI KETNFTSRSE ERSENQSNNF TTNSGCEQGT 540 IDNGVIKNVA LSAPIIPQVG TSAGRPSNDL LPRILPLPEN GKSKPEVDRE V

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MGEVGNRETD NLPPPNAQTN SAEVVSSDVP AKKLARQLNF TGLGGAVLPD LPHFHPQPRS  60
QSDSPAVMVV QSQSQPKSPQ HLMVSPIGTQ APHPVRKPDS PKSRSRSNVE TKDATPKKQK  120
QCNCKHSRCL KLYCECFASG IYCDGCNCTN CYNNVENEAF RREAVETTLE RNPNAFRPKI  180
ASSPHGTREV RDEVGDVVML GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF  240
EGSEERQALF HGDHVSNMAY IQQAANAAIT GAIGSSGYAY LPTSKKRKVP ELCFASVGKD  300
PPLNSIPQFH QVNNLMSSGT STSSPLPVAH AGSPAAPGTS KFSFRSLLAD LVQPHDLKEL  360
CSVLVVLSSE VAKNIAEKRI AEEQINDPLQ ISRASSAGDG SQHQKADEKA ADGGCGSLNQ  420
SEMPVHDNHS DSSDMTKSRP MSPGTLALMC DERDTMFMGA APADRLAGHG CNTSSHVPDK  480
SVSEVYIEQE RIVLTKFRDC LNKLITLGEI KETNFTSRSE ERSENQSNNF TTNSGCEQGT  540
IDNGVIKNVA LSAPIIPQVG TSAGRPSNDL LPRILPLPEN GKSKPEVDRE V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-163	CPP family protein