PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961344.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 297aa    MW: 32714.5 Da    PI: 6.0401
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961344.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-17110159255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  XP_022961344.1 110 LFRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALTIKG 159
                     59****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MAPSIYKPLY THSCRGDLTS NAPRLSLPLS LNTSLFESFV FLLHFTMPLL IENDSTTFSF  60
SSPSPSPSPS SSGSLSMVLL GESDQSGTAV DSNRKRAKRP RENSNSKHPL FRGVRMRAWG  120
KWVSEIREPR KKSRIWLGTF STPEMAARAH DVAALTIKGN SAILNFPELA DQFPRPASNS  180
PRDVQAAAAK AASMEIPTPP PSSSSSSSSS SLCPSTPEEL SEIVQLPSLG TSYETAELGN  240
EFVFVDSVEG WLYSYPWYQR VNNNADEEQS HGFFRDQIST DSITPPSSSF EAFLWQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.17e-63ERF family protein