PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961365.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 371aa MW: 41286.9 Da PI: 8.4668

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961365.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_022961365.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.6e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_022961365.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MFHPKKASSM NSHERGVCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DGMRASGLEL HRNTISSSNM 120 INRTMNDNSN MVDVIRMQME VQRRLHEQLE VQRHLQLRIE AQGKYMQSIL EKACQTLAGE 180 DMAASGGYKL MPGIPSNNNQ QGVGDMGGGI KDFGTPLGFP SFQDLNLYGG HQLDLQQNVD 240 GFMPHNDSLL CLGKKKPRPP ANYGSGKYAL DWPDDLRLQG IGMTPPQQAD HEFKDINIVA 300 TLAERGHLEE MYEAKPVGSD ESMLGDHKKY DTNDNASLKL QRPSPRRAPL SAETVNQSLT 360 SAPQVTLSPF G

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MFHPKKASSM NSHERGVCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DGMRASGLEL HRNTISSSNM  120
INRTMNDNSN MVDVIRMQME VQRRLHEQLE VQRHLQLRIE AQGKYMQSIL EKACQTLAGE  180
DMAASGGYKL MPGIPSNNNQ QGVGDMGGGI KDFGTPLGFP SFQDLNLYGG HQLDLQQNVD  240
GFMPHNDSLL CLGKKKPRPP ANYGSGKYAL DWPDDLRLQG IGMTPPQQAD HEFKDINIVA  300
TLAERGHLEE MYEAKPVGSD ESMLGDHKKY DTNDNASLKL QRPSPRRAPL SAETVNQSLT  360
SAPQVTLSPF G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-113	G2-like family protein