PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961509.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 465aa MW: 51432.7 Da PI: 6.8249

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961509.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.2	2.9e-16	58	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW +eE+e++++a k++G + W+ I +++g ++t+ q++s+ qk+ XP_022961509.1 58 RERWKEEEHEKFIEALKLYGRD-WRQIEEHVG-TKTAVQIRSHAQKF 102 78****************77.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MGAANMQSQN TGGGLCSDNT SSSLYESTAT ADQLKDPFSS GKEYCPKARK PYTITKQRER 60 WKEEEHEKFI EALKLYGRDW RQIEEHVGTK TAVQIRSHAQ KFFSKVMRNS NGCTATLGGC 120 IEIPPPRPKR KPAHPYPRKE VPGSHKLSSI SEQTRSLSPQ LSEKECQSPT STVVAAGGSD 180 ALNCANSRIH HDSASPDSSI PSSEPNSSSL DNESPTVSPG TDNSTPQEKI SKNLELFPKD 240 VNEKDVSTKE VSIQSLKLFG RTVLITNPHK QTPTVETCAF EADRKQGENH KQISPWNSSK 300 VMGNTEGTWN HGAFYFIQLN SSDSNQDPGS TVPVSWWSSY GSYPLSFVQC FKQADSELNQ 360 EVDDKETHKD QSCCGSNTGS VNSEETGDKY GENDIQSYKL FPNRDGDSVS KDELIGNALS 420 SELISSHEKN TKGFVPYKRC MTDRATKSHS ITAAEREEKR IRLCL

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MGAANMQSQN TGGGLCSDNT SSSLYESTAT ADQLKDPFSS GKEYCPKARK PYTITKQRER  60
WKEEEHEKFI EALKLYGRDW RQIEEHVGTK TAVQIRSHAQ KFFSKVMRNS NGCTATLGGC  120
IEIPPPRPKR KPAHPYPRKE VPGSHKLSSI SEQTRSLSPQ LSEKECQSPT STVVAAGGSD  180
ALNCANSRIH HDSASPDSSI PSSEPNSSSL DNESPTVSPG TDNSTPQEKI SKNLELFPKD  240
VNEKDVSTKE VSIQSLKLFG RTVLITNPHK QTPTVETCAF EADRKQGENH KQISPWNSSK  300
VMGNTEGTWN HGAFYFIQLN SSDSNQDPGS TVPVSWWSSY GSYPLSFVQC FKQADSELNQ  360
EVDDKETHKD QSCCGSNTGS VNSEETGDKY GENDIQSYKL FPNRDGDSVS KDELIGNALS  420
SELISSHEKN TKGFVPYKRC MTDRATKSHS ITAAEREEKR IRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	6e-43	MYB_related family protein