PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961598.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YC

Protein Properties

Length: 252aa MW: 28165.7 Da PI: 6.8913

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961598.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	176.5	2.7e-55	73	176	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie++ dfknh+lPlarikki+kadedv+misaeaPvl+++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl XP_022961598.1 73 QLQAFWSNQyqeIERVIDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 167 89****99999****************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_022961598.1 168 VDIVPREDL 176 ****987 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MDQHGHGQSP SMGAVGSGGQ IAYGSSMYHP SQMTVGPTSG SQSTSQPSGA QLAQHQLAYQ 60 HIHHHQQQQL QQQLQAFWSN QYQEIERVID FKNHSLPLAR IKKIMKADED VRMISAEAPV 120 LFARACEMFI LELTLRSWNH TEENKRRTLQ KNDIAAAITR TDIFDFLVDI VPREDLKDEA 180 LTSIPRGSIT VGPPGDALPY CYMSSQHAPQ VGTPGMIMGK PVMDPGSYAQ QSHPYMPPQM 240 WQHGQDRTPT HQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	152	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	1e-80	NF-YC family protein