PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961602.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 327aa MW: 37233.7 Da PI: 7.0448

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961602.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.3	2e-55	23	149	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv++yL++kv + ++++ +i e+d++k+ePw+Lp k+k +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdke+++ XP_022961602.1 23 LPPGFRFHPTDEELVTHYLTPKVIDPNFSA-VAIGEADLNKSEPWELPGKAKMGEKEWYFFCIKDRKYPTGMRTNRATESGYWKATGKDKEIFR- 115 79***********************999.67***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++ vg+kktLvfy+grapkgek++Wvmheyrle XP_022961602.1 116 GKRIVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 149 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MQNHSTMRNP NHNHAGEEDH IELPPGFRFH PTDEELVTHY LTPKVIDPNF SAVAIGEADL 60 NKSEPWELPG KAKMGEKEWY FFCIKDRKYP TGMRTNRATE SGYWKATGKD KEIFRGKRIV 120 GMKKTLVFYR GRAPKGEKSN WVMHEYRLEG RSPLSPSLLK PIKTEWVICR IFYKSSGDKR 180 THISELLPHK HISDANGNSP ALPPLMEYSH LQTPYTYDAR ASRVTCFSNN PLLDETKPYT 240 NADMLYNANS LLPFSYPNPP PDSGWPPGNS IVKTLLENQT GGGSGLHYNN NNNNNQVFSH 300 GIGMMEEDPH DPSSSDDPID LENLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39610.1	8e-96	NAC family protein