PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961672.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 292aa MW: 32814.1 Da PI: 6.7153

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961672.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.2	1.4e-13	105	156	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_022961672.1 105 QRMTHIAVERNRRKQMNEYLAILRSLMPSS---YVQRGDQASIIGGAINFVKELE 156 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MALEAVVFPQ DPFTYVCRDV CSHGGGGAWA GYDHGFQLEQ QKPFLGVPET QTEDTKFAGN 60 WEASPEECSI NQPIPGGALY TPPCTGRRKR RRTRSTKNRE EIENQRMTHI AVERNRRKQM 120 NEYLAILRSL MPSSYVQRGD QASIIGGAIN FVKELEQQLQ FINTHKNTIE NGGSPFAEFF 180 SFPQYSTKNT AHDSSITHTQ WPAGDIEVTM IDTHANLKIL SPKRPRQLLK MVAGFQSLRL 240 TVLHLNVTTS DQMVLYSLSI KVEEGCQLNT VDEIAAAVNQ ILLFIQEEAA LN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	92	RKRRR
2	88	93	RKRRRT
3	106	117	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-87	bHLH family protein