PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961730.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 308aa    MW: 33941.3 Da    PI: 8.9488
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961730.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.14.8e-30139199160
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                     ++Dgy+WrKYGqK+ k+++ pr+YY+C++a +Cpvk+kv+rs edp++++ tYegeHnh+k
  XP_022961730.1 139 VKDGYQWRKYGQKVTKDNPSPRAYYKCSFApSCPVKRKVQRSVEDPSYLVATYEGEHNHPK 199
                     58***************************99****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEPSATINTS LDLNFNPPPY TDDESPATSN LTPLKSETPA VLAEKLNRMS SENQKLNQML  60
GRVVENYSLL QNQVIRLMFK SRKRKAGGDS CNFNRSGSDQ YCGCCSDDDS CYKRPRESSK  120
PKVMRVLVST PVSDSSLVVK DGYQWRKYGQ KVTKDNPSPR AYYKCSFAPS CPVKRKVQRS  180
VEDPSYLVAT YEGEHNHPKP NSGIEYQLVG PIQLGSNLDS SVSSPSSSVV KGPSIMPSVV  240
TYDYLSKSPS TTNTVKASVP ELETPPASSS TQTILVQQMA SLLTRDPNFT RALATAITGT  300
MVDKEIWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-64WRKY family protein