PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961744.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 315aa MW: 34917.7 Da PI: 6.2623

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961744.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.2	4.5e-16	51	100	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + a+ L +++eY+++Lq XP_022961744.1 51 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 100 899***********************9....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MRTGKSNQED EEYEDDEMVA KREGPSSTSN ANSSIGNSKD AKNNDRANAI RSKHSVTEQR 60 RRSKINERFQ ILRDLIPHSD QKRDTASFLL EVIEYVQYLQ EKVQKYEGSY QNWSGEPTKL 120 IPWRNTHWRM QTFVGHPQSV KNGSASGPTY SGKFDDNNIS ISPAMLASSQ NPLDSHSGRD 180 VLQDADITNK VPLPMSLEGN IHASIRSDGV LDQSLQIPIS GGQATECPIA NNASSQPEEM 240 AIEGGTISIS SLYSEGLLNS LTQALQNTGL DLSQASVSIQ VDLGKRANKG PPFGMPIFKN 300 WTKEGRNLCL YRQFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-111	bHLH family protein