PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961794.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 522aa MW: 55315.7 Da PI: 8.1526

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961794.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.5	2.7e-07	94	138	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l avk+ G g+W+ I r + Rt+ q+ rw XP_022961794.1 94 RKPWSEAEDLELMAAVKKCGEGNWANIIRgdFLS-DRTASQLSQRW 138 789**********************995521344.66666666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MENYFFQVFI SSGSSSDLNV PSSSTIEAPL TISLPRSYRD GVQFENVDPA CSIKGASITV 60 PVSVQRQPVL TPPSVEGLNA NGSTYGNNAS RRKRKPWSEA EDLELMAAVK KCGEGNWANI 120 IRGDFLSDRT ASQLSQRWAI IKKKHGNLTV GANTAGTHLS EVQLAARHAM SLALDRHVVG 180 SLKAARISGS ASTNKIGNGS SLAAVPTSEQ VQDKLHQSPT HTKPSPIGSS SLTAKAQVTT 240 SKKMIPKSSF DSDCIVRAAA VAAGARIASP ADAASLLKAA QSKNVIHITA KIPASTKTPT 300 PGRGSNHLEA HPSIKTTTLS NTPAVMPSLS RGVPVKTTSL QTATLSSVPT DQNIAVASVT 360 AAADPLSEKE IKTVEDVRGR GLGGVQTTFQ KNDHCLSRES LSERVIDEKP ADLGPALKRQ 420 TTETNSCSSS SQNMPTADGY IKVETCNQVE ERQNSNTSAV PDSSDQQEIM NQSQVERSKP 480 QDMDVDSDGK DTPITKADGR SENSEHKEDV NEILEGNTAV KS

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MENYFFQVFI SSGSSSDLNV PSSSTIEAPL TISLPRSYRD GVQFENVDPA CSIKGASITV  60
PVSVQRQPVL TPPSVEGLNA NGSTYGNNAS RRKRKPWSEA EDLELMAAVK KCGEGNWANI  120
IRGDFLSDRT ASQLSQRWAI IKKKHGNLTV GANTAGTHLS EVQLAARHAM SLALDRHVVG  180
SLKAARISGS ASTNKIGNGS SLAAVPTSEQ VQDKLHQSPT HTKPSPIGSS SLTAKAQVTT  240
SKKMIPKSSF DSDCIVRAAA VAAGARIASP ADAASLLKAA QSKNVIHITA KIPASTKTPT  300
PGRGSNHLEA HPSIKTTTLS NTPAVMPSLS RGVPVKTTSL QTATLSSVPT DQNIAVASVT  360
AAADPLSEKE IKTVEDVRGR GLGGVQTTFQ KNDHCLSRES LSERVIDEKP ADLGPALKRQ  420
TTETNSCSSS SQNMPTADGY IKVETCNQVE ERQNSNTSAV PDSSDQQEIM NQSQVERSKP  480
QDMDVDSDGK DTPITKADGR SENSEHKEDV NEILEGNTAV KS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	6e-38	MYB_related family protein