PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961925.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 336aa    MW: 37700.5 Da    PI: 4.4998
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961925.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.6e-12172215654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  A+eY+k+L
  XP_022961925.1 172 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILADAIEYMKEL 215
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MELDEHVFLE ELMALRRDSN WDAIPNELSD LCWNAWAFDY CFDQSGMNFH PNSSSEPLSA  60
QNLDEFYHPL GNEFSVPGMD GSAYAAMEVA ATPLPFQGER PNAEREGEGE EEEELGFLAD  120
EIQNMEVVQV QSACKMEPNQ SPELPVFNIG TCSSIEQKNR SKKLQGQPSK NLMAERRRRK  180
RLNDRLSMLR SIVPKISKMD RTAILADAIE YMKELLEKIG NLQREVDGSN PSTNSLNNTK  240
PSELIARNSP KFEVESRMGK TRIEICCAAK PGLILSTVNT IEALGLEIQQ CVISSFNDFA  300
LQATCSSQEM KQKTELKPEE LKEALFRNAG YGGSCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175182ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-75bHLH family protein