PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961942.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 364aa MW: 42099.2 Da PI: 6.7596

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961942.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	88.1	1e-27	69	150	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rrem+ ++++k++k+lWe++s+kmrergf rsp++C++kw+nl k++kk k+++++ s +++y++++e XP_022961942.1 69 WVQDETRSLISLRREMDGLFNTSKSNKHLWEQISAKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGS---GSAKMSYYKEIE 150 ******************************************************************84...556899*998 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MYLSDKPRPI DIYKEEGSRD MMIEVASNGD HHIQPHQPQP THQQHQMMLG DSSGEDHEVK 60 APKKRAETWV QDETRSLISL RREMDGLFNT SKSNKHLWEQ ISAKMRERGF DRSPTMCTDK 120 WRNLLKEFKK AKHHDRGSGS AKMSYYKEIE EILKERSKST QYKSPTPPKI DSYIQFADKG 180 GRPSLNLERQ LDHDGHPLAI TAADAVAATG IPPWNWREAP GNDGESQAFG GRVISVKWGD 240 YTRRIGIDGT SEAIKEAIKS AFRLRTKRAF WLEDEDQVIR SLDRDMPLGN YTLHLDEGLA 300 VKICLYDESD HLPVHTEEKI FYIEEDYRDF LTRRGWTCLR EFDGYRNIDT MDDLRPGAIY 360 RGIS

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MYLSDKPRPI DIYKEEGSRD MMIEVASNGD HHIQPHQPQP THQQHQMMLG DSSGEDHEVK  60
APKKRAETWV QDETRSLISL RREMDGLFNT SKSNKHLWEQ ISAKMRERGF DRSPTMCTDK  120
WRNLLKEFKK AKHHDRGSGS AKMSYYKEIE EILKERSKST QYKSPTPPKI DSYIQFADKG  180
GRPSLNLERQ LDHDGHPLAI TAADAVAATG IPPWNWREAP GNDGESQAFG GRVISVKWGD  240
YTRRIGIDGT SEAIKEAIKS AFRLRTKRAF WLEDEDQVIR SLDRDMPLGN YTLHLDEGLA  300
VKICLYDESD HLPVHTEEKI FYIEEDYRDF LTRRGWTCLR EFDGYRNIDT MDDLRPGAIY  360
RGIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein