PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962059.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 339aa    MW: 37851.8 Da    PI: 5.6796
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962059.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.7e-1958107255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa+a++ a+++++g
  XP_022962059.1  58 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAARAYDCAARSMRG 107
                     59*******.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MEDSFRRVNN NTNNTNTNNP FLDYQMKSNA TTTTAAPTSA TGLKRTLRDH NSTTATMRYR  60
GVRRRPWGRY AAEIRDPQSK ERRWLGTFDT AEEAARAYDC AARSMRGLKA RTNFVYPSSP  120
PPHSLSDEYV IPRFNFPKQS HPGLPRVNAS NWPMFSTPSR GADFLWSGAQ RINTASPTLD  180
MLLLRDFLNF PSANASNPKP PSLINNTAAT KIAASPPPPP PPPDHSVQQQ NYYSSQFLPK  240
DSPDSGLLEE IIHGFFPKSD YSNSNSDEQS DPVADELNNQ HSPSFTIDLD LLDYPDCSIQ  300
AEFNEGGERV FGNPENVMLD DIFQCPEVLN AFAAKLENA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.14e-16ERF family protein