PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962098.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 154aa MW: 18003.8 Da PI: 4.7282

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962098.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.4	1.1e-31	94	152	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YY+C+ +gCpvkk+ver++edpk+v++tYeg H+he XP_022962098.1 94 LDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTHE 152 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
MSYNSNQHLD KSENDLPEQP GFEFTDWMFD RWLDENSPPL VDSAMYPAYQ SGEIEEFDGS 60 TIQQGEPSSI GDNGREREVR ERFAFKTKSE VEVLDDGFKW RKYGKKMVKN SPNPRNYYKC 120 SVEGCPVKKR VERDREDPKY VITTYEGVHT HESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	4e-44	WRKY family protein