PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962109.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 547aa MW: 61591.7 Da PI: 5.0142

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962109.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	75.5	7e-24	200	253	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+++ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_022962109.1 200 KARVVWSVDLHQKFVKAVDHI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253 68*****************.9*****************************8 PP
2	Myb_DNA-binding	34.5	4.9e-11	202	252	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av G + +k+I m+ +t++++ s++qky+ XP_022962109.1 202 RVVWSVDLHQKFVKAVDHIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 252 678***********************************************7 PP
3	Response_reg	82.6	1.3e-27	21	129	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++eal ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_022962109.1 21 VLVVDDDPTWLRILEKMLKKCSY-EVTTCCLAREALSLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 113 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_022962109.1 114 ACDYLLKPIRMKELRN 129 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MVMENGFSSP RSDAFPVGLR VLVVDDDPTW LRILEKMLKK CSYEVTTCCL AREALSLLRE 60 RKDGYDIVIS DVNMPDMDGF KLLEHVGLEM DLPVIMMSVD GETSRVMKGV QHGACDYLLK 120 PIRMKELRNI WQHVLRKKIQ EGRDIEGHDV LEGIQILRNG SDRYDDSQFL RGEELFSLRK 180 RKDIDKHEDR EFCDTSSTKK ARVVWSVDLH QKFVKAVDHI GFDKVGPKKI LDLMNVPWLT 240 RENVASHLQK YRLYLSRLQK ENDPKVCFVV GMKHTDSCSK DREGNFSLCS SLAGPQTDVT 300 NSSFSFSGDN FLLQNDSSEP KRAAAAAAAA ARSVPEPIKL AAFDPSKRTC YPWVDAPETK 360 FKQEIKPVVH SEGDFSQFPA TVPPHHVQID QLQSISSISS EQSATEKDIA SSIESKPMYS 420 EECSQQMVHV NLPKVATDPS STTTAAAAAT TLGKKNQSLN LSSISTDIGS GLPFETFDEE 480 LQGYLLEDGC YPKNLDHQQI IEFPDYGDPG LFTEVPAYLY DAMRFGYEYS YDPTEYYPVI 540 DEGLFIA

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MVMENGFSSP RSDAFPVGLR VLVVDDDPTW LRILEKMLKK CSYEVTTCCL AREALSLLRE  60
RKDGYDIVIS DVNMPDMDGF KLLEHVGLEM DLPVIMMSVD GETSRVMKGV QHGACDYLLK  120
PIRMKELRNI WQHVLRKKIQ EGRDIEGHDV LEGIQILRNG SDRYDDSQFL RGEELFSLRK  180
RKDIDKHEDR EFCDTSSTKK ARVVWSVDLH QKFVKAVDHI GFDKVGPKKI LDLMNVPWLT  240
RENVASHLQK YRLYLSRLQK ENDPKVCFVV GMKHTDSCSK DREGNFSLCS SLAGPQTDVT  300
NSSFSFSGDN FLLQNDSSEP KRAAAAAAAA ARSVPEPIKL AAFDPSKRTC YPWVDAPETK  360
FKQEIKPVVH SEGDFSQFPA TVPPHHVQID QLQSISSISS EQSATEKDIA SSIESKPMYS  420
EECSQQMVHV NLPKVATDPS STTTAAAAAT TLGKKNQSLN LSSISTDIGS GLPFETFDEE  480
LQGYLLEDGC YPKNLDHQQI IEFPDYGDPG LFTEVPAYLY DAMRFGYEYS YDPTEYYPVI  540
DEGLFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-122	ARR-B family protein