PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962219.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 241aa    MW: 26871.2 Da    PI: 8.6554
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962219.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.56.8e-155399354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r+h+e+ErrRR+riNs +++Lr++lP+      +K +Ka+ L ++v ++k+L
  XP_022962219.1 53 RSHKEAERRRRQRINSHLSTLRTILPNT-----TKTDKASLLAEVVSHVKEL 99
                    78*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MLPFQSHYGF QSSWLNYRDG DHFKRSMSAA GCSIVGNAAD SSKDEKKSTE ASRSHKEAER  60
RRRQRINSHL STLRTILPNT TKTDKASLLA EVVSHVKELR RRATEVAHRS ADQCDGDGGK  120
VPWAFPSEED EATLCYCDNE NRLMRATVCC DERSGLNRDL IQAIRSVHAR VVRAEMMTLG  180
GRTKNVVVLE WSGGGDGGGR EEAFVGLRRA LKAVVENQAQ NLSGHKRARA CCPIEDPFYM  240
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.15e-34bHLH family protein