PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962220.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 253aa    MW: 27714 Da    PI: 6.7402
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962220.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-1885134255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t  +Aa a+++a+++l+g
  XP_022962220.1  85 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHDAAMAYDNAARRLYG 134
                     69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MDTIYSILLA KYHPHPSAGH VSSSSHFLAL TPILLYSPSI HIPLAIFSSM LKSSKQVKRS  60
PSASHATSRK GCMRGKGGPE NASCTYKGVR QRTWGKWVAE IREPNRGARL WLGTFDTSHD  120
AAMAYDNAAR RLYGSEAKLN LPHLSPNLQL HNHPLLLPGS VSSSSDSAAA TVEDVGSISS  180
APHDNSSRMR FGEEEEEEIG GLWRSMSISL DDSIWAEAAM SLDFPVVEDR DRQGVFAADF  240
VDSNGWDTLQ WCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-43ERF family protein