PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962229.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 413aa MW: 46138.3 Da PI: 4.8891

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962229.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	24.8	5.9e-08	72	151	33	128
NAM 33 vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +++++ y+++P++Lp + wy+ + + g + g+Wk + d +++s +++ +g + + +y+g+ap +kt Wvm+ y XP_022962229.1 72 NVHDINPYQCKPENLP------DGVWYYVEGNVDA---G------SSFGRWKLKDGDCKLYS-SSSFTGGRASYEYYEGQAPYESKTAWVMQKYW 150 5889999999999998......3356655444332...2......34588*********9.8899*************************7 PP NAM 128 l 128 + XP_022962229.1 151 M 151 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MTNEETSANR LSSSLIDDLP ALDKSRQEFC LLLVTMTPST VTSSTILDLF STDNETFLAL 60 WRIRSGGSFP ANVHDINPYQ CKPENLPDGV WYYVEGNVDA GSSFGRWKLK DGDCKLYSSS 120 SFTGGRASYE YYEGQAPYES KTAWVMQKYW MNQMDLRATF EQKETSSLCK VFLGDEQFQN 180 NEMIQKTEFS SILNSEPILN HQLVVTDGST SNNMASGSTS KSKMNEDDKM VELADAGKRL 240 DNHLEDIHPE MDYCLGDDYL ELLDLDNPTS SSSSSENSSC LSMSSNEDFD TMDVLCDVER 300 EINHDRGRRD AACIHSSAPF KLKKEVVHQV ASDSLVTIIR SHTAAKETPK TDSSANMKLP 360 SQSKKEGYRM KGASSSCHNK VVSNGEETGV DGGKKRVGRR EKSPKKYFCF FAL

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MTNEETSANR LSSSLIDDLP ALDKSRQEFC LLLVTMTPST VTSSTILDLF STDNETFLAL  60
WRIRSGGSFP ANVHDINPYQ CKPENLPDGV WYYVEGNVDA GSSFGRWKLK DGDCKLYSSS  120
SFTGGRASYE YYEGQAPYES KTAWVMQKYW MNQMDLRATF EQKETSSLCK VFLGDEQFQN  180
NEMIQKTEFS SILNSEPILN HQLVVTDGST SNNMASGSTS KSKMNEDDKM VELADAGKRL  240
DNHLEDIHPE MDYCLGDDYL ELLDLDNPTS SSSSSENSSC LSMSSNEDFD TMDVLCDVER  300
EINHDRGRRD AACIHSSAPF KLKKEVVHQV ASDSLVTIIR SHTAAKETPK TDSSANMKLP  360
SQSKKEGYRM KGASSSCHNK VVSNGEETGV DGGKKRVGRR EKSPKKYFCF FAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	4e-10	NAC family protein