PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962257.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 327aa    MW: 37093.7 Da    PI: 8.2089
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962257.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.78.7e-161463148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48
                     +g+W++eEd +l+ +++++G+g +W + ++++  ++R++k+c++rw++yl
   XP_022962257.1 14 KGPWSPEEDAKLKSYIEKHGTGgNWIALPQKIVgLKRCGKSCRLRWLNYL 63
                     79**********************************************97 PP
2Myb_DNA-binding36.98.3e-1270112246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++eEd ++  +    G++ W+ Ia+ ++ gRt++++k++w++
   XP_022962257.1  70 GGFSEEEDRIICSLYVSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 112
                      569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE KHGTGGNWIA LPQKIVGLKR CGKSCRLRWL  60
NYLRPNIKHG GFSEEEDRII CSLYVSIGSR WSIIAAQLPG RTDNDIKNYW NTRLKKKLFG  120
KQRKEHHHQQ QATRRGNALK QMQQMKRPLE NNNNATNYGA ENNNIAIFSL NEAHNNIPYW  180
PQQQQLPLGP HYNQGSLPAS DPINPIENLS KFGGQSMGEE SGYSNMNNNA NGYGHFLPIM  240
QGQSSNQMVE VEVENYNMTG YEDPRRVLCG LEFLFEDHHQ ILGTNGHGCD MGSLQSSSCP  300
NYEPIMLQDL PTTAEQYNAK FDDLRIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.13e-82MYB family protein