PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962316.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 208aa    MW: 23151.7 Da    PI: 6.244
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962316.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.6e-183382255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+++++g
  XP_022962316.1 33 LYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPSPEMAARAHDVAALSIKG 82
                    69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MSRNENATTT CSSPEPNKKP KRIRDTEDSK HPLYRGVRMR NWGKWVSEIR EPRKKSRIWL  60
GTFPSPEMAA RAHDVAALSI KGKAAILNFP DLVHLLPRPV SLAPRDVQAA AAKAARMHHF  120
SSTHTNNNNS SSSSSSDATD ELTEIVQLPS LGTSYDGGDG GFGGEFVFFD SGQELESGCW  180
MYTPPWVQSL EDCDNDDYGK FEGLLWDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-54ERF family protein