PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962355.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 208aa    MW: 23191.3 Da    PI: 10.005
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962355.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.4e-08120160954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++++P       +K++ a++L +A++Y+k L
  XP_022962355.1 120 ARHRRERISERIRILQRIVPGG-----TKMDTASMLDEAIHYVKFL 160
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MDVLTQMENF SEFFEFTDFG SSTSHRFQNP TPPILPSYAL SSTASMNNAT HPLAPPCPPP  60
HSPAATPNSH TKQQQDSMGA MREMIYRIAA MQPIQIDPEA VKPPKRRNVK ISKDPQSVAA  120
RHRRERISER IRILQRIVPG GTKMDTASML DEAIHYVKFL KSQVQSLQIA ANNRPSSAFR  180
FPAAMSAGGS NYKQFQFAQS GHEHVEDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.15e-41bHLH family protein