PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962365.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 226aa    MW: 23204.5 Da    PI: 7.7046
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962365.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000257496123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C++C + F ++  L  H++ H
  XP_022962365.1 74 YECQYCYREFANSQALGGHQNAH 96
                    99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAALDHFQTK PNNNNPTTRL KLFGFDVQED FEDDSGRTPS GSSDSGGGGV GGGGGGGGGG  60
GGGGAAAASG ERKYECQYCY REFANSQALG GHQNAHKKER QQLKRAQLQA SRNAAVLRNP  120
IVSAFSPPLH LLPSPAATSS ASWVYMPRAP PQFQVSHGSV FTPAYVEAPP QPPPPSAAAF  180
FSIGSRSAHG MVDGPSLSRF SKAEGGSGFD DGPGLDLHLS LAPAAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.14e-13C2H2 family protein