PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962432.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 395aa MW: 44195.3 Da PI: 5.09

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962432.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	93.4	3.7e-29	57	199	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 lp+G++F+Ptdee++ +L++k++ +l+l+ +i+++d i++++P++Lp v+++ ++++fF+k++++yatg+rk+r+ ++ XP_022962432.1 57 LPAGVKFDPTDEEIM-GHLAAKCAVGNLKLHAlideFIPTLDtdqgICYTHPENLP-GVSKDGNDVHFFHKTSNAYATGQRKRRKiesedsssME 149 799*********9.889999999995554333333444444455******.6677889****************85777666655 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+v++ kg + g kk++ +y ++ +k+e+++Wv+h+y+l XP_022962432.1 150 HFRWHKTGKTKAVID-KGVHRGWKKIFSLYrsSKGGSKPERSSWVIHQYHL 199 778********.9999******4423456777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MIMARAWILD SRTFARKVRN ISQSSSQVIK DCDAKRECPN CHFIIDNTDV SPEWPGLPAG 60 VKFDPTDEEI MGHLAAKCAV GNLKLHALID EFIPTLDTDQ GICYTHPENL PGVSKDGNDV 120 HFFHKTSNAY ATGQRKRRKI ESEDSSSMEH FRWHKTGKTK AVIDKGVHRG WKKIFSLYRS 180 SKGGSKPERS SWVIHQYHLG VEEDEKEGEY VLSKISYQQP KQCSKSNDNM LIEDFDALLH 240 QTSPRTPKSN PPIPPRSGKS FVSNDVAENG LPQSFAKVEE LTPEAAHISL ENDVGFPGWL 300 AGESQGIDDA ELHYLEDNLL CNEVLDSNVL TSNSQLTQMS FPLSGSNGCH EIVNDNVTCG 360 IADLENLELD TPPDFHLADL QFGSQESIFD WLDRI

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MIMARAWILD SRTFARKVRN ISQSSSQVIK DCDAKRECPN CHFIIDNTDV SPEWPGLPAG  60
VKFDPTDEEI MGHLAAKCAV GNLKLHALID EFIPTLDTDQ GICYTHPENL PGVSKDGNDV  120
HFFHKTSNAY ATGQRKRRKI ESEDSSSMEH FRWHKTGKTK AVIDKGVHRG WKKIFSLYRS  180
SKGGSKPERS SWVIHQYHLG VEEDEKEGEY VLSKISYQQP KQCSKSNDNM LIEDFDALLH  240
QTSPRTPKSN PPIPPRSGKS FVSNDVAENG LPQSFAKVEE LTPEAAHISL ENDVGFPGWL  300
AGESQGIDDA ELHYLEDNLL CNEVLDSNVL TSNSQLTQMS FPLSGSNGCH EIVNDNVTCG  360
IADLENLELD TPPDFHLADL QFGSQESIFD WLDRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	8e-91	NAC family protein