PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962440.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 230aa    MW: 24900 Da    PI: 4.8332
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962440.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.82.2e-06127148223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     +C  C+k+F+++  L  H+r+H
  XP_022962440.1 127 RCATCNKVFKSWKALFGHLRSH 148
                     6********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MEKNANTNVP SETSSDQRHG GERSPTGPTS PPPTHNRDNN PNPTTEHSSY SDTLRVPPAA  60
ETSRRDALLD VGTSYQNIVG SSEGEPGKKR GRGDGEEEEE QQQPPQQQVK AAKKKGELTE  120
VPKGEPRCAT CNKVFKSWKA LFGHLRSHPE RTYRGALPPP TAAELDIRRC QQQLASTLLT  180
VAQEVAASRR GLDIDLNQPS TADDGDSPEK TGGVGFDLNA DPPPESDDED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18793GKKRGRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35700.18e-19C2H2 family protein