PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962673.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 412aa MW: 47255.2 Da PI: 9.9344

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962673.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.6	7e-16	14	99	8	98
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++l+ + l++pkkf+++hg+ s+ ++l+ ++g +W+v l + +++ ++l++GW +F++ L+ g +vFk dg s+f ++f+ XP_022962673.1 14 HNNLEDRKLMIPKKFVKDHGE--LLSTSVRLKLPDGMEWKVGL--TTAPNGvVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTF--QTSIFD 99 55677778*********84..58999***********..77777779**********************5554555..777776 PP
2	B3	61.5	1.4e-19	201	287	1	88
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrs 88 f+ v+++++v + +++pk+fae+h ++l++++gr+W + ++ r++++ +++++GWk+Fv++n LkegD+ +F+l++++ XP_022962673.1 201 FKIVMKQPNVRGKFAMIIPKDFAEKHlpddF------GIIKLQTPNGRKWPLLYKRRRNQENfVYFSSGWKRFVEENVLKEGDIGLFQLIKKD 287 677899999999************64321......26***********775444446***********************99754 PP
3	B3	42	1.7e-13	321	404	11	99
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +k+ l +p fa+eh ++ +s +l++ + r+W v l r++++++ l++GW F +ngL++gD+++F+++++++ ++v++f++ XP_022962673.1 321 HKKFVLNIPMVFAKEHFSSDMRSAKLQVGN---RQWIVAL--RQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKH 404 5667799*******77767777777555...***..*****************************9987666678888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MAASSPQFFR IVLHNNLEDR KLMIPKKFVK DHGELLSTSV RLKLPDGMEW KVGLTTAPNG 60 VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI LNDSRAEFTM 120 EDEDSDENTE SSSQRLSKRK NKPSVPSPPQ SRKKMKAEEE GCLIMKNMPK TEAGVSSRRQ 180 QFVNKLEAAQ RFTSKSEKPS FKIVMKQPNV RGKFAMIIPK DFAEKHLPDD FGIIKLQTPN 240 GRKWPLLYKR RRNQENFVYF SSGWKRFVEE NVLKEGDIGL FQLIKKDIFS FTKLQDTSPF 300 PSPATKTRNP CFEANILNRR HKKFVLNIPM VFAKEHFSSD MRSAKLQVGN RQWIVALRQY 360 GSSVRLSAGW CLFYGDNGLE DGDSCLFEMV DTKNCVFKVT IFKHVSSSAS MD

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MAASSPQFFR IVLHNNLEDR KLMIPKKFVK DHGELLSTSV RLKLPDGMEW KVGLTTAPNG  60
VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI LNDSRAEFTM  120
EDEDSDENTE SSSQRLSKRK NKPSVPSPPQ SRKKMKAEEE GCLIMKNMPK TEAGVSSRRQ  180
QFVNKLEAAQ RFTSKSEKPS FKIVMKQPNV RGKFAMIIPK DFAEKHLPDD FGIIKLQTPN  240
GRKWPLLYKR RRNQENFVYF SSGWKRFVEE NVLKEGDIGL FQLIKKDIFS FTKLQDTSPF  300
PSPATKTRNP CFEANILNRR HKKFVLNIPM VFAKEHFSSD MRSAKLQVGN RQWIVALRQY  360
GSSVRLSAGW CLFYGDNGLE DGDSCLFEMV DTKNCVFKVT IFKHVSSSAS MD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-31	B3 family protein