PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962675.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 398aa MW: 45708.3 Da PI: 10.0203

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962675.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.7	6.6e-16	14	99	8	98
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++l+ + l++pkkf+++hg+ s+ ++l+ ++g +W+v l + +++ ++l++GW +F++ L+ g +vFk dg s+f ++f+ XP_022962675.1 14 HNNLEDRKLMIPKKFVKDHGE--LLSTSVRLKLPDGMEWKVGL--TTAPNGvVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTF--QTSIFD 99 55677778*********84..58999***********..77777779**********************5554555..777776 PP
2	B3	61.6	1.3e-19	187	273	1	88
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrs 88 f+ v+++++v + +++pk+fae+h ++l++++gr+W + ++ r++++ +++++GWk+Fv++n LkegD+ +F+l++++ XP_022962675.1 187 FKIVMKQPNVRGKFAMIIPKDFAEKHlpddF------GIIKLQTPNGRKWPLLYKRRRNQENfVYFSSGWKRFVEENVLKEGDIGLFQLIKKD 273 677899999999************64321......26***********775444446***********************99754 PP
3	B3	42.1	1.6e-13	307	390	11	99
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +k+ l +p fa+eh ++ +s +l++ + r+W v l r++++++ l++GW F +ngL++gD+++F+++++++ ++v++f++ XP_022962675.1 307 HKKFVLNIPMVFAKEHFSSDMRSAKLQVGN---RQWIVAL--RQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKH 390 5667799*******77767777777555...***..*****************************9987666678888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MAASSPQFFR IVLHNNLEDR KLMIPKKFVK DHGELLSTSV RLKLPDGMEW KVGLTTAPNG 60 VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI LNDSRAEFTM 120 EDEDSDENTE SSSQRLSKRK NKPSVPSPPQ SRKKMKAEEG VSSRRQQFVN KLEAAQRFTS 180 KSEKPSFKIV MKQPNVRGKF AMIIPKDFAE KHLPDDFGII KLQTPNGRKW PLLYKRRRNQ 240 ENFVYFSSGW KRFVEENVLK EGDIGLFQLI KKDIFSFTKL QDTSPFPSPA TKTRNPCFEA 300 NILNRRHKKF VLNIPMVFAK EHFSSDMRSA KLQVGNRQWI VALRQYGSSV RLSAGWCLFY 360 GDNGLEDGDS CLFEMVDTKN CVFKVTIFKH VSSSASMD

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MAASSPQFFR IVLHNNLEDR KLMIPKKFVK DHGELLSTSV RLKLPDGMEW KVGLTTAPNG  60
VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI LNDSRAEFTM  120
EDEDSDENTE SSSQRLSKRK NKPSVPSPPQ SRKKMKAEEG VSSRRQQFVN KLEAAQRFTS  180
KSEKPSFKIV MKQPNVRGKF AMIIPKDFAE KHLPDDFGII KLQTPNGRKW PLLYKRRRNQ  240
ENFVYFSSGW KRFVEENVLK EGDIGLFQLI KKDIFSFTKL QDTSPFPSPA TKTRNPCFEA  300
NILNRRHKKF VLNIPMVFAK EHFSSDMRSA KLQVGNRQWI VALRQYGSSV RLSAGWCLFY  360
GDNGLEDGDS CLFEMVDTKN CVFKVTIFKH VSSSASMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	4e-30	B3 family protein