PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962682.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 296aa    MW: 32796.4 Da    PI: 8.4443
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962682.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000142002371254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ ++++ L++l+ +      +K + +++L++A+ YI+ L
  XP_022962682.1 200 RKEKLGDRISALQRLVAPF-----GKTDTSSVLTEAIGYIQFL 237
                     7778899*********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MESANLQELF SGYSSLVPAP RPPLLTHECI PNTILDGNSY NNNNPYLMDQ TLPCSRENEN  60
PWFNFSSNYQ QQQQEQPNEH HLSNLYSCVQ SPTSYGGFQG LSTGSNTNYY SNVFSSSTRN  120
STSTTSTLDL LSSSSLQAAD PHLGLLSSGF NKKRALFGYV QDSIHNNSSN RVKRPLNSSS  180
LAKKSNAHES KRSCPPLKVR KEKLGDRISA LQRLVAPFGK TDTSSVLTEA IGYIQFLHDQ  240
VETLSMPYLG SSQSKPYQKL QPGSTQEDGA KPRPDLRSRG LCLMPLSWAS FIHGYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.16e-37bHLH family protein