PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962709.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 201aa    MW: 22591.7 Da    PI: 7.0976
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962709.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.8e-09109150854
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_022962709.1 109 AARLRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 150
                     6799*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MDPHHLPNPS PHLQFSALDD PDIVHLHHVH ELSSIWPSLL LPHQPLPTSS THLMSGYGND  60
QEEPEEELGA MKEMMYKIAA MQPVDIDPST IRKPKRRNVR ISDDPQSIAA RLRRERISEK  120
IRILQRLVPG GTKMDTASML DEAIRYVKFL KRQIQFLQST QPSTGDSAVA GGWPFPFHKA  180
NTSNSSSTSM EATPTIMPSG W
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111116RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.13e-47bHLH family protein