PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962745.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 358aa MW: 41693.6 Da PI: 4.9629

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962745.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.8	1.4e-55	10	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vik++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_022962745.1 10 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIKDIDLYRIEPWDLQEkcwIGYEEQNEWYFFSHKDKKYPTGTRTNRATLAGFWKATGRDKAV 103 69**************************.9***********953543344677******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++l+g++ktLvfy+grap+g+ktdW+mheyrle XP_022962745.1 104 YD-KNKLIGMRKTLVFYRGRAPNGQKTDWIMHEYRLE 139 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MMESMESSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW 60 IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLI GMRKTLVFYR 120 GRAPNGQKTD WIMHEYRLES DENGPPQEEG WVVCRAFKKR ANGQSKTAVE RWDSSYFYDE 180 PSRVCSGIDP LEFMSRQSMP QGLLEHNNMM CKQEMEGENV KLIAYNDPFV QLPQLESPSL 240 PLMKRSSSIS LVSECNEEEE PPTKRRYDNN NNRSSKVTDW RALDKFVASQ LSQEDAFEGE 300 GDSRFGAQNN NYINNNNHNS ADMAILLMEN RGHDEDNLYK EFLSSNPESD FGICIFEK

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MMESMESSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW  60
IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLI GMRKTLVFYR  120
GRAPNGQKTD WIMHEYRLES DENGPPQEEG WVVCRAFKKR ANGQSKTAVE RWDSSYFYDE  180
PSRVCSGIDP LEFMSRQSMP QGLLEHNNMM CKQEMEGENV KLIAYNDPFV QLPQLESPSL  240
PLMKRSSSIS LVSECNEEEE PPTKRRYDNN NNRSSKVTDW RALDKFVASQ LSQEDAFEGE  300
GDSRFGAQNN NYINNNNHNS ADMAILLMEN RGHDEDNLYK EFLSSNPESD FGICIFEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-131	NAC family protein