PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962877.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 218aa    MW: 24556.9 Da    PI: 7.9481
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962877.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA64.51.2e-20118152135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++
  XP_022962877.1 118 CANCDTTTTPLWRNGPSGPKSLCNACGIRYKKEER 152
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MMQRCGSYQC YSAGECSCEA AFYGQQTTFF SMPAYNNYYE SQHYSFQSSS PVVDCTLSLG  60
TPSTRMTEFD EKRREEQQSA SNFAWDLSRT KHPPSSKSGR RGGDKSSSNA DQMFARHCAN  120
CDTTTTPLWR NGPSGPKSLC NACGIRYKKE ERKAASSGQQ ASSMYRNETS SWLQHHSHTQ  180
RTPRFAHGIG NDMNPSVAIL SWSLNDTEQP QLYYDFTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.13e-39GATA family protein