PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962883.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 289aa    MW: 32815.8 Da    PI: 6.8014
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962883.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind117.11.1e-36101022103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k y++++d+++++++sw+e+g++f+v++++efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++F++g++ell+k
  XP_022962883.1  10 FLVKAYQLVDDPATDDIVSWNETGSTFIVWKTSEFASDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFTNNNFRRGQNELLSK 95 
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+ks+
  XP_022962883.1  96 IRRRKSS 102
                     ****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MAHMSHPAPF LVKAYQLVDD PATDDIVSWN ETGSTFIVWK TSEFASDLLP NYFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF TNNNFRRGQN ELLSKIRRRK SSHRCHRSKS SEGGNSSPSY  120
YSGEEIGSTS SSSPDSKNPG IVDLETMAQL ADMTDENNKL RKENEMLKLE LAKAKEKCNH  180
LVAFMTDDLK VAPELIDKII KKLENNNNNN KKVADLNVNG EKMEEENAGD LKLFGVWLKR  240
GKKEKNNDKN KTKREEEEKV EVCGNEPEAK VMKTAEMEEA LATTSDAGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.13e-51HSF family protein