PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962889.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 433aa MW: 48278.5 Da PI: 4.4188

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962889.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	148.7	3e-46	7	133	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrF+Pt elv++yLk+kv +kkl+ vi+e+diyk+ PwdLp k ++k+++ +wyfF++r++kya+g r nr tk g+Wk+tgkd++v + XP_022962889.1 7 PPGFRFQPTHVELVMFYLKRKVMQKKLPR-GVISELDIYKYAPWDLPdKsCMKSGDLKWYFFCPRERKYASGARMNRGTKFGFWKSTGKDRPVSC 100 8************************99.99**********96358888999********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e+vg ktL+f++g+apkg t+Wvmheyr+ XP_022962889.1 101 -NNEDVGQIKTLTFFRGKAPKGDPTNWVMHEYRI 133 .999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MKRSSQPPGF RFQPTHVELV MFYLKRKVMQ KKLPRGVISE LDIYKYAPWD LPDKSCMKSG 60 DLKWYFFCPR ERKYASGARM NRGTKFGFWK STGKDRPVSC NNEDVGQIKT LTFFRGKAPK 120 GDPTNWVMHE YRIEEKKLSL QNVAQDAYVL CVIFQKDGPG PRNGAQYGAP FIEEDWDSDD 180 PEDVDNPSGL SVLPRTEPSS SFAPDTSTAP SNIFGCSSAS YITENLASTS KEIPQIAYGS 240 VAPVEMPQNL DNMNDGITME ELFLDGNSNF NDANGFQATV AASNNADRID TIFEGLENID 300 GWSDAFNGNG NGYITDHQMI HSSTFPIDRA IVSSDPMSFL ELTDLDIPLS PNYQDPMSFL 360 ELNDLNSTYN RDSINEPCFP FSSFGAAYDP GYPDAHISGS SQLAGLQENV PPNSNEGCNG 420 FEASWPKFDW NSH

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MKRSSQPPGF RFQPTHVELV MFYLKRKVMQ KKLPRGVISE LDIYKYAPWD LPDKSCMKSG  60
DLKWYFFCPR ERKYASGARM NRGTKFGFWK STGKDRPVSC NNEDVGQIKT LTFFRGKAPK  120
GDPTNWVMHE YRIEEKKLSL QNVAQDAYVL CVIFQKDGPG PRNGAQYGAP FIEEDWDSDD  180
PEDVDNPSGL SVLPRTEPSS SFAPDTSTAP SNIFGCSSAS YITENLASTS KEIPQIAYGS  240
VAPVEMPQNL DNMNDGITME ELFLDGNSNF NDANGFQATV AASNNADRID TIFEGLENID  300
GWSDAFNGNG NGYITDHQMI HSSTFPIDRA IVSSDPMSFL ELTDLDIPLS PNYQDPMSFL  360
ELNDLNSTYN RDSINEPCFP FSSFGAAYDP GYPDAHISGS SQLAGLQENV PPNSNEGCNG  420
FEASWPKFDW NSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	5e-81	NAC family protein