PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962907.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 210aa MW: 22434.4 Da PI: 7.5427

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962907.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.5	2.4e-34	52	133	5	86
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnss 86 +++ ++hTkv+gR+RRvR++a+caar+F+L+ eLG+ +d++tieWLl+qa+p+i+++tgt++++a +++s + ++s++s XP_022962907.1 52 SSSSRDRHTKVNGRGRRVRMPALCAARIFQLTCELGHRSDGETIEWLLRQAEPSIIAATGTGTIPAAPISTVSPVMASSAPS 133 56889********************************************************999996555555555544444 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MVSEILPHKF PSSSDPHPQT TASHSLAVAT DSSLPNTTQP VVHRKSSTAL SSSSSRDRHT 60 KVNGRGRRVR MPALCAARIF QLTCELGHRS DGETIEWLLR QAEPSIIAAT GTGTIPAAPI 120 STVSPVMASS APSVACRVQP VAVAAAAGGQ RMFGMPPPSC RLNLCQPVGM NYSAGGDDYR 180 YMPFTALLLQ PATADEAEER HEAEEIFREQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	1e-32	TCP family protein