PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962943.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 328aa    MW: 36966 Da    PI: 4.5329
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962943.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.5e-1961111656
                     S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++  +q+++Le+ Fe ++++  e++ +LA++lgL+ rqV vWFqNrRa++k
  XP_022962943.1  61 RLGVDQVKVLEKTFEIENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 111
                     56779*********************************************9 PP
2HD-ZIP_I/II130.37.9e-4258149293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     kkrrl  +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++yd+lk++ ++L++++++L +++ke
  XP_022962943.1  58 KKRRLGVDQVKVLEKTFEIENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDTLKRSFDTLQQDNDALLKQIKE 149
                     9****************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MKRHGSSDSL GALMSVCPTS EEQSPRNRHV YGMEFQSMLE GLDEEEGSME EHCHLGGKKR  60
RLGVDQVKVL EKTFEIENKL EPERKVKLAQ ELGLQPRQVA VWFQNRRARW KTKQLERDYG  120
VLKANYDTLK RSFDTLQQDN DALLKQIKEL KSKIQEEKTE SNLSVKEEIF AFESDTFLIE  180
QTNNSLPVDL ISLPAASDQS DDFNYESFKS AAVATDVDGG DQRVEVSLFP DFKDGSSDSD  240
SSAILNEDNS PNAVVSSAAA GILQSHHQIL SSPASSLNCF PFQKAAYNNA QPFVKIEEHN  300
FFSGEETCNL FSDEQAPSLQ WCIPDQWN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15887KKRRLGVDQVKVLEKTFEIENKLEPERKVK
2106114RRARWKTKQ
3127132DTLKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.19e-71HD-ZIP family protein