PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962963.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 306aa    MW: 33974.1 Da    PI: 10.0161
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962963.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding353.2e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
   XP_022962963.1  5 KQKWTAEEEAALKAGVIKHGAGKWRTILTDPEfssilHQRSNVDLKDKWRN 55
                     79***********************************99***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV IKHGAGKWRT ILTDPEFSSI LHQRSNVDLK DKWRNINVTA  60
IWGSRQKAKL ALKKNPLALK HHDDPMPVST VHQNEEIVDA KPLAISNGTI RTNGPKEPLA  120
RLDKLISEAI NNLKEQRGSD RAAIAMYIEE HYWAPPNLKK LLSTKLKHMT ANGKLIKVKH  180
KYRIDPNSTL SGRRNVPLLL LEDKQMDSSK AEKSEVKIIT KSQVDSELSK MKIMTTEEAA  240
IAAARAVAEA EAAIAEAERA AREAEEAEAE AESAQVFAEA AMKALECRMF PSRNPIQKVL  300
LQGNVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.11e-70MYB_related family protein