PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963034.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 216aa    MW: 23886.4 Da    PI: 6.6864
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963034.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.1e-1665114255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ykG+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  XP_022963034.1  65 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFYLRG 114
                     59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MPVAPPQSDP PFSFFHEDSD SDSDSDSDFG LAKGRAQIWD SLGMDGVAEA GREATRKRGV  60
DNQRPYKGIR MRKWGKWVAE IREPNKRSRI WLGSYSSPVA AARAYDTAVF YLRGPSARLN  120
FPELLAGEGR GISGGCGGDM SAASIRKKAT EVGARVDALE SSVGDHQRQH QHRRHVRQAS  180
ACPPESKGYG GYLDRVDLNK LPDPEEEIEE ADRERE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.19e-51ERF family protein